Store muffins, biscuits and scones in an airtight container at room temperature. (If made with cheese, cream cheese or other perishable foods, they should be stored in the refrigerator.)Muffins stay fresh for up to 3 days. Biscuits and scones should be eaten within 1 to 2 days.You can freeze muffins for up to 1 month and biscuits and scones for up to 3 months.